21#include "matpack_data.h"
29 Index& abs_xsec_agenda_checked,
32 const Agenda& abs_xsec_agenda,
34 bool needs_continua =
false;
35 bool needs_cia =
false;
38 for (Index sp = 0; sp < abs_species.
nelem(); sp++) {
39 for (Index tgs = 0; tgs < abs_species[sp].
nelem(); tgs++) {
40 switch (abs_species[sp][tgs].Type()) {
41 case Species::TagType::Plain:
43 case Species::TagType::Zeeman:
45 case Species::TagType::Predefined:
47 case Species::TagType::Cia:
50 case Species::TagType::FreeElectrons:
52 case Species::TagType::Particles:
54 case Species::TagType::XsecFit:
65 !abs_xsec_agenda.
has_method(
"abs_xsec_per_speciesAddConts"),
66 "*abs_species* contains continuum species but *abs_xsec_agenda*\n"
67 "does not contain *abs_xsec_per_speciesAddConts*.");
70 "*abs_species* contains CIA species but *abs_xsec_agenda*\n"
71 "does not contain *abs_xsec_per_speciesAddCIA*.");
74 abs_xsec_agenda_checked = 1;
79 const Index& atmosphere_dim,
81 const Vector& lat_grid,
82 const Vector& lon_grid,
84 const Tensor3& t_field,
85 const Tensor4& vmr_field,
86 const Tensor3& wind_u_field,
87 const Tensor3& wind_v_field,
88 const Tensor3& wind_w_field,
89 const Tensor3& mag_u_field,
90 const Tensor3& mag_v_field,
91 const Tensor3& mag_w_field,
92 const Index& abs_f_interp_order,
93 const Index& negative_vmr_ok,
98 chk_atm_field(
"t_field", t_field, atmosphere_dim, p_grid, lat_grid, lon_grid);
109 "All values in *vmr_field* must be >= 0.");
113 "All temperatures in *t_field* must be > 0.");
116 if (wind_w_field.npages() > 0) {
124 if (atmosphere_dim < 3 && wind_v_field.npages() > 0) {
132 if (atmosphere_dim > 2) {
133 if (wind_u_field.npages() > 0) {
134 if (wind_v_field.npages() > 0) {
135 bool chk_poles =
false;
165 if (wind_v_field.npages() > 0) {
177 if (wind_u_field.npages() > 0 || wind_v_field.npages() > 0 ||
178 wind_w_field.npages() > 0) {
180 "You have a wind field set, but abs_f_interp_order zero.\n"
181 "This is not allowed. Though abs_f_interp_order only is\n"
182 "required and has an effect if absorption lookup tables\n"
183 "are used, for safety reasons you also have to set it >0\n"
184 "in case of on-the-fly absorption.")
188 if (mag_w_field.npages() > 0) {
196 if (mag_u_field.npages() > 0) {
197 if (mag_v_field.npages() > 0) {
198 bool chk_poles =
false;
228 if (mag_v_field.npages() > 0) {
239 atmfields_checked = 1;
244 const Index& atmosphere_dim,
245 const Vector& p_grid,
246 const Vector& lat_grid,
247 const Vector& lon_grid,
248 const Tensor3& z_field,
249 const Vector& refellipsoid,
250 const Matrix& z_surface,
251 const Vector& lat_true,
252 const Vector& lon_true,
253 const Numeric& max500hpa_gradient,
262 "The WSV *refellispoid* must be a vector of "
265 "The first element of *refellipsoid* must "
268 "The second element of *refellipsoid* must be "
271 "For 1D, the second element of *refellipsoid* "
272 "(the eccentricity) must be 0.");
274 chk_atm_field(
"z_field", z_field, atmosphere_dim, p_grid, lat_grid, lon_grid);
275 chk_atm_surface(
"z_surface", z_surface, atmosphere_dim, lat_grid, lon_grid);
278 for (Index row = 0; row < z_field.nrows(); row++) {
279 for (Index col = 0; col < z_field.ncols(); col++) {
281 os <<
"z_field (for latitude nr " << row <<
" and longitude nr " << col
291 for (Index row = 0; row < z_surface.nrows(); row++) {
292 for (Index col = 0; col < z_surface.ncols(); col++) {
294 z_surface(row, col) >= z_field(z_field.npages() - 1, row, col),
295 "The surface altitude (*z_surface*) cannot be outside\n"
296 "of the altitudes in *z_field*.\n"
297 "z_surface: ", z_surface(row, col),
"\n"
298 "min of z_field: ", z_field(0, row, col),
"\n"
299 "max of z_field: ", z_field(z_field.npages() - 1, row, col),
301 (atmosphere_dim > 1) ?
var_string(
"\nThis was found to be the case for:\n",
"latitude ", lat_grid[row]) :
var_string(),
309 if (atmosphere_dim > 1) {
311 Index ip = -1; Numeric dpmin = 99e99;
312 for (Index i=0; i<p_grid.nelem(); i++) {
313 const Numeric dp = abs(p_grid[i] - 500e2);
319 Numeric maxgrad = -1;
320 for (Index ilon=0; ilon<
max(1,lon_grid.nelem()); ilon += 10) {
321 for (Index ilat=1; ilat<lat_grid.nelem(); ilat++) {
322 const Numeric grad = abs((z_field(ip,ilat,ilon)-z_field(ip,ilat-1,ilon)) /
323 (lat_grid[ilat]-lat_grid[ilat-1]));
329 maxgrad *= 100.0/111.0;
330 if (maxgrad > max500hpa_gradient) {
332 os <<
"A check of the altitude of the " << p_grid[ip]/100
333 <<
" hPa level has been made.\nThe maximum gradient found matches "
334 << maxgrad <<
" m/100km, that exceeds\nthe set limit of "
335 << max500hpa_gradient <<
" m/100km (by GIN *max500hpa_gradient*).\n"
336 <<
"Please check the smoothness of *z_field*.";
337 throw runtime_error(os.str());
342 if (atmosphere_dim < 3 && (lat_true.nelem() || lon_true.nelem())) {
343 if (atmosphere_dim == 1) {
345 "For 1D, *lat_true* must have length 1.");
347 "For 1D, *lon_true* must have length 1.");
348 }
else if (atmosphere_dim == 2) {
350 "For 2D, *lat_true* must have same length as *lat_grid*.");
352 "For 2D, *lon_true* must have same length as *lat_grid*.");
355 "If *lat_true* is set, also *lon_true* must be "
356 "set (and have the same length).");
358 "Values in *lat_true* must be inside [-90,90].");
360 "Values in *lon_true* must be inside [-180,360].");
369 const Index& atmfields_checked,
370 const Index& atmosphere_dim,
371 const Vector& p_grid,
372 const Vector& lat_grid,
373 const Vector& lon_grid,
374 const Tensor3& z_field,
375 const Matrix& z_surface,
376 const Tensor3& wind_u_field,
377 const Tensor3& wind_v_field,
378 const Tensor3& wind_w_field,
379 const Index& cloudbox_on,
381 const Tensor4& pnd_field,
382 const ArrayOfTensor4& dpnd_field_dx,
386 const Matrix& particle_masses,
388 const Index& demand_latlon_margin,
389 const Index& negative_pnd_ok,
392 "The atmospheric fields must be flagged to have "
393 "passed a consistency check (atmfields_checked=1).");
400 !wind_v_field.empty() ||
401 !wind_u_field.empty(),
402 "The scattering methods are not (yet?) handling winds. For this\n"
403 "reason, the WSVs for wind fields must all be empty with an\n."
409 Index has_absparticles = 0;
410 for (Index sp = 0; sp < abs_species.
nelem() && has_absparticles < 1; sp++) {
411 if (abs_species[sp].Particles()) {
412 has_absparticles = 1;
416 "For scattering calculations (cloudbox is on),"
417 "abs_species is not allowed to contain\n"
418 "'particles' (absorbing-only particles)!");
422 "The array *cloudbox_limits* has incorrect length.\n"
423 "For atmospheric dim. = ", atmosphere_dim,
424 " the length shall be ", atmosphere_dim * 2,
" but it is ",
425 cloudbox_limits.
nelem(),
".")
426 ARTS_USER_ERROR_IF (cloudbox_limits[1] <= cloudbox_limits[0] || cloudbox_limits[0] < 0 ||
427 cloudbox_limits[1] >= p_grid.
nelem(),
428 "Incorrect value(s) for cloud box pressure limit(s) found."
429 "\nValues are either out of range or upper limit is not "
430 "greater than lower limit.\nWith present length of "
431 "*p_grid*, OK values are 0 - ", p_grid.nelem() - 1,
432 ".\nThe pressure index limits are set to ", cloudbox_limits[0],
433 " - ", cloudbox_limits[1],
".")
435 Index nlat = 1, nlon = 1;
437 if (atmosphere_dim > 1) {
438 nlat = lat_grid.nelem();
439 if (demand_latlon_margin) {
441 cloudbox_limits[2] < 1 ||
442 cloudbox_limits[3] >= nlat - 1,
443 "Incorrect value(s) for cloud box latitude limit(s) found."
444 "\nValues are either out of range or upper limit is not "
445 "greater than lower limit.\nWith present length of "
446 "*lat_grid* and demand_latlon_margin set to true, "
447 "OK values are 1 - ", nlat - 2,
448 ".\nThe latitude index limits are set to ", cloudbox_limits[2],
449 " - ", cloudbox_limits[3],
".")
451 lat_grid[0] < LAT_LON_MIN) &&
452 (atmosphere_dim == 2 ||
453 (atmosphere_dim == 3 && lat_grid[0] > -90)),
454 "Too small distance between cloudbox and lower end of "
456 "This distance must be ", LAT_LON_MIN,
" degrees.\n"
457 "Cloudbox ends at ", lat_grid[cloudbox_limits[2]],
458 " and latitude grid starts at ", lat_grid[0],
".")
460 lat_grid[cloudbox_limits[3]] < LAT_LON_MIN) &&
461 (atmosphere_dim == 2 ||
462 (atmosphere_dim == 3 && lat_grid[nlat - 1] < 90)),
463 "Too small distance between cloudbox and upper end of "
465 "This distance must be ", LAT_LON_MIN,
" degrees.\n"
466 "Cloudbox ends at ", lat_grid[cloudbox_limits[3]],
467 " and latitude grid ends at ", lat_grid[nlat - 1],
".")
470 cloudbox_limits[2] < 0 ||
471 cloudbox_limits[3] >= nlat,
472 "Incorrect value(s) for cloud box latitude limit(s) found."
473 "\nValues are either out of range or upper limit is not "
474 "greater than lower limit.\nWith present length of "
475 "*lat_grid* and demand_latlon_margin set to false, "
476 "OK values are 0 - ", nlat - 1,
477 ".\nThe latitude index limits are set to ", cloudbox_limits[2],
478 " - ", cloudbox_limits[3],
".")
482 if (atmosphere_dim > 2) {
483 nlon = lon_grid.nelem();
484 if (demand_latlon_margin) {
486 cloudbox_limits[4] < 1 ||
487 cloudbox_limits[5] >= nlon - 1,
488 "Incorrect value(s) for cloud box longitude limit(s) found"
489 ".\nValues are either out of range or upper limit is not "
490 "greater than lower limit.\nWith present length of "
491 "*lon_grid* and demand_latlon_margin set to true,"
492 "OK values are 1 - ", nlon - 2,
493 ".\nThe longitude limits are set to ", cloudbox_limits[4],
494 " - ", cloudbox_limits[5],
".")
495 if (lon_grid[nlon - 1] - lon_grid[0] < 360) {
496 const Numeric latmax =
max(abs(lat_grid[cloudbox_limits[2]]),
497 abs(lat_grid[cloudbox_limits[3]]));
498 const Numeric lfac = 1 / cos(
DEG2RAD * latmax);
501 "Too small distance between cloudbox and lower end of"
502 "the longitude\ngrid. This distance must here be ",
503 LAT_LON_MIN / lfac,
" degrees.")
506 "Too small distance between cloudbox and upper end of"
507 "the longitude\ngrid. This distance must here be ",
508 LAT_LON_MIN / lfac,
" degrees.")
512 cloudbox_limits[4] < 0 ||
513 cloudbox_limits[5] >= nlon,
514 "Incorrect value(s) for cloud box longitude limit(s) found"
515 ".\nValues are either out of range or upper limit is not "
516 "greater than lower limit.\nWith present length of "
517 "*lon_grid* and demand_latlon_margin set to false,"
518 "OK values are 0 - ", nlon - 1,
519 ".\nThe longitude limits are set to ", cloudbox_limits[4],
520 " - ", cloudbox_limits[5],
".")
525 for (Index o = 0; o < nlon; o++) {
526 for (Index
a = 0;
a < nlat;
a++) {
528 "The upper vertical limit of the cloudbox must be above "
529 "the surface altitude (for all latitudes and longitudes).");
537 Vector g1(cloudbox_limits[1] - cloudbox_limits[0] + 1), g2(0), g3(0);
538 if (atmosphere_dim > 1) {
539 g2.resize(cloudbox_limits[3] - cloudbox_limits[2] + 1);
541 if (atmosphere_dim > 2) {
542 g3.resize(cloudbox_limits[5] - cloudbox_limits[4] + 1);
545 chk_atm_field(
"pnd_field", pnd_field, atmosphere_dim, np, g1, g2, g3);
548 "Negative values in *pnd_field* not allowed.");
552 for (Index
a = 0;
a < g2.nelem();
a++) {
553 for (Index o = 0; o < g3.nelem(); o++) {
555 z_field(cloudbox_limits[0],
a, o) > z_surface(
a, o),
556 "A non-zero value found in *pnd_field* at the"
557 " lower altitude limit of the cloudbox (but the "
558 "position is not at or below the surface altitude).");
564 if (cloudbox_limits[1] != p_grid.
nelem() - 1)
566 "A non-zero value found in *pnd_field* at "
567 "upper altitude limit of the cloudbox.");
568 if (atmosphere_dim >= 2) {
570 "A non-zero value found in *pnd_field* at "
571 "lower latitude limit of the cloudbox.");
573 "A non-zero value found in *pnd_field* at "
574 "upper latitude limit of the cloudbox.");
576 if (atmosphere_dim == 3) {
578 "A non-zero value found in *pnd_field* at "
579 "lower longitude limit of the cloudbox.");
581 "A non-zero value found in *pnd_field* at "
582 "upper longitude limit of the cloudbox.");
587 "Size of *dpnd_field_dx* inconsistent with number "
588 "of *jacobian_quantities*.");
594 if (scat_species.
nelem() > 0)
596 "Number of scattering species specified by scat_species does\n"
597 "not agree with number of scattering species in scat_data:\n"
598 "scat_species has ", scat_species.
nelem(),
599 " entries, while scat_data has ", scat_data.
nelem(),
".")
602 if (!particle_masses.empty()) {
604 "The WSV *particle_masses* must either be "
605 "empty or have a row size matching the "
606 "length of *scat_data*.");
608 "All values in *particles_masses* must be >= 0.");
613 cloudbox_checked = 1;
619 const Vector& f_grid,
620 const Numeric& dfrel_threshold,
621 const String& check_level,
622 const Numeric& sca_mat_threshold,
630 "*dfrel_threshold* too large (max. allowed: 0.5, your's: ",
631 dfrel_threshold,
").")
637 Index nf = f_grid.nelem();
638 Index N_ss = scat_data.
nelem();
639 for (Index i_ss = 0; i_ss < N_ss; i_ss++) {
640 Index N_se = scat_data[i_ss].
nelem();
641 for (Index i_se = 0; i_se < N_se; i_se++) {
646 Index nf_se = scat_data[i_ss][i_se].f_grid.
nelem();
649 "*scat_data* must have either one or *f_grid* (=", nf,
650 ") frequency entries,\n"
651 "but scattering element #", i_se,
" in scattering species #",
652 i_ss,
" has ", nf_se,
".")
653 for (Index f = 0; f < nf_se; f++) {
655 scat_data[i_ss][i_se].f_grid[f], f_grid[f], 0.5e-9),
656 "*scat_data* frequency grid has to be identical to *f_grid*\n"
657 "(or contain only a single entry),\n"
658 "but scattering element #", i_se,
659 " in scattering species #", i_ss,
660 " deviates for f_index ", f,
".")
665 (abs(1. - scat_data[i_ss][i_se].f_grid[0] / f_grid[nf - 1]) >
667 "Frequency entry (f=", scat_data[i_ss][i_se].f_grid[0],
668 "Hz) of scattering element #", i_se,
"\n"
669 "in scattering species #", i_ss,
" is too far (>",
670 dfrel_threshold * 1e2,
"%) from one or more\n"
671 "of the f_grid limits (fmin=", f_grid[0],
672 "Hz, fmax=", f_grid[nf - 1],
"Hz).")
680 ostringstream bs1, bs2;
681 bs1 <<
"Frequency dimension of ";
683 bs2 <<
" must be ssd.f_grid.nelem() (=" << nf_se <<
"),\n"
684 <<
"but scattering element #" << i_se <<
" in scattering species #"
686 Index nf_sd = scat_data[i_ss][i_se].pha_mat_data.nlibraries();
688 bs1.str(),
"pha_mat_data", bs2.str(), nf_se,
".")
689 nf_sd = scat_data[i_ss][i_se].ext_mat_data.nshelves();
691 bs1.str(),
"ext_mat_data", bs2.str(), nf_se,
".")
692 nf_sd = scat_data[i_ss][i_se].abs_vec_data.nshelves();
694 bs1.str(),
"abs_vec_data", bs2.str(), nf_se,
".")
700 ostringstream bs1, bs2;
701 Index nt_se = scat_data[i_ss][i_se].T_grid.
nelem();
702 bs1 <<
"Temperature dimension of ";
704 bs2 <<
" must be ssd.T_grid.nelem() (=" << nt_se <<
"),\n"
705 <<
"but for scattering element #" << i_se
706 <<
" in scattering species #" << i_ss <<
" it is ";
707 Index nt_sd = scat_data[i_ss][i_se].pha_mat_data.nvitrines();
709 bs1.str(),
"pha_mat_data", bs2.str(), nt_sd,
".")
710 nt_sd = scat_data[i_ss][i_se].ext_mat_data.nbooks();
712 bs1.str(),
"ext_mat_data", bs2.str(), nt_se,
".")
713 nt_sd = scat_data[i_ss][i_se].abs_vec_data.nbooks();
715 bs1.str(),
"abs_vec_data", bs2.str(), nt_se,
".")
720 if (check_level.
toupper() !=
"NONE") {
727 scat_dataCheck(scat_data, check_level, sca_mat_threshold, verbosity);
731 scat_data_checked = 1;
747 "abs_lines_per_species and abs_species must have same length.\n"
748 "Instead len(abs_lines_per_species) = ",
749 abs_lines_per_species.
nelem(),
750 " and len(abs_species) = ",
754 for (Index i=0; i<abs_species.
nelem(); i++) {
755 auto& specs = abs_species[i];
756 auto& lines = abs_lines_per_species[i];
758 if (not specs.nelem()) {
759 if (not lines.nelem()) {
765 const bool any_zeeman = std::any_of(specs.cbegin(), specs.cend(), [](
auto& x){return x.Type() == Species::TagType::Zeeman;});
766 ARTS_USER_ERROR_IF (any_zeeman and (not std::all_of(specs.cbegin(), specs.cend(), [](
auto& x){return x.Type() == Species::TagType::Zeeman;})),
767 "Zeeman species found but not all sub-species tags support Zeeman effect.\n"
768 "Offending tag: ", specs,
'\n')
771 for (
auto& band: lines) {
773 "Zeeman effects are not symmetric, you cannot use cutoff.\n");
774 for (Index k=0; k<band.NumLines(); k++) {
775 bool hasJ = band.lines[k].localquanta.val.has(QuantumNumberType::J);
776 bool hasF = band.lines[k].localquanta.val.has(QuantumNumberType::F);
778 "No J(s) or F(s) yet declared Zeeman splitting.\n");
780 auto& qn = hasF ? band.lines[k].localquanta.val[QuantumNumberType::F] : band.lines[k].localquanta.val[QuantumNumberType::J];
782 "Bad Wigner numbers for upper state F or J. Try increasing the Wigner memory allocation.\n");
784 "Bad Wigner numbers for lower state F or J. Try increasing the Wigner memory allocation.\n");
786 auto Ze = band.lines[k].zeeman;
788 "Bad value(s) in the upper Zeeman data not allowed when modeling Zeeman effect.\n");
790 "Bad value(s) in the lower Zeeman data not allowed when modeling Zeeman effect.\n");
797 for (
auto& band: lines) {
799 std::any_of(band.lines.cbegin(), band.lines.cend(),
800 [](
auto& x){return x.F0 <= 0;}),
801 "Negative or zero frequency in non-Manual mirrored band.\n");
805 for (
auto& lines: abs_lines_per_species) {
806 for (
auto& band: lines) {
809 for (
auto& line: band.lines) {
810 if (band.mirroring == Absorption::MirroringType::Manual) {
812 "Must have negative frequency, finds " , line.F0)
815 "Must have positive frequency, finds " , line.F0)
820 switch (band.cutoff) {
821 case Absorption::CutoffType::None:
break;
822 case Absorption::CutoffType::ByLine: {
824 band.mirroring == Absorption::MirroringType::Manual),
825 "Cutoff only possible with symmetric mirroring types")
827 "Cannot have relaxation matrix line mixing with cutoff calculations")
829 band.lineshapetype == LineShape::Type::LP or
830 band.lineshapetype == LineShape::Type::VP),
831 "Cutoff only possible with symmetric line shape types")
832 for (
auto& line: band.lines) {
833 for (
auto& single_data: line.lineshape.Data()) {
836 single_data.Y().type not_eq LineShape::TemperatureModel::None or
837 single_data.DV().type not_eq LineShape::TemperatureModel::None,
838 "Cannot have Rosenkranz-style line mixing with cutoff calculations\n"
839 "Note that abs_lines_per_speciesTurnOffLineMixing will make this error go away by modifying the data\n"
844 case Absorption::CutoffType::FINAL:
ARTS_USER_ERROR(
"You have a band with undefined cutoff type.")
855 Index& propmat_clearsky_agenda_checked,
858 const Agenda& propmat_clearsky_agenda,
860 bool needs_lines =
false;
861 bool needs_zeeman =
false;
862 bool needs_predefined =
false;
863 bool needs_continua =
false;
864 bool needs_cia =
false;
865 bool needs_free_electrons =
false;
866 bool needs_particles =
false;
867 bool needs_hxsec =
false;
869 for (
auto& tag_groups: abs_species) {
870 for (
auto& tag: tag_groups) {
871 switch (tag.Type()) {
872 case Species::TagType::Plain:
875 case Species::TagType::Zeeman:
878 case Species::TagType::Predefined:
879 needs_predefined =
true;
881 case Species::TagType::Cia:
884 case Species::TagType::FreeElectrons:
885 needs_free_electrons =
true;
887 case Species::TagType::Particles:
888 needs_particles =
true;
890 case Species::TagType::XsecFit:
894 ARTS_ASSERT(
false,
"Unknown species type: ", tag.Type())
902 not(propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddLines") or
904 "propmat_clearskyAddFromLookup")),
905 "*abs_species* contains normal lines species but *propmat_clearsky_agenda*\n"
906 "cannot support lines.");
911 "propmat_clearskyAddXsecAgenda") or
912 propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddConts") or
914 "propmat_clearskyAddFromLookup")),
915 "*abs_species* contains legacy continua but *propmat_clearsky_agenda*\n"
916 "cannot support these.");
921 "propmat_clearskyAddXsecAgenda") or
922 propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddCIA") or
924 "propmat_clearskyAddFromLookup")),
925 "*abs_species* contains CIA models but *propmat_clearsky_agenda*\n"
926 "cannot support these.");
930 not(propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddXsecAgenda") or
931 propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddXsecFit") or
933 "propmat_clearskyAddFromLookup")),
934 "*abs_species* contains Hitran XSEC models but *propmat_clearsky_agenda*\n"
935 "cannot support these.");
939 not(propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddPredefined") or
941 "propmat_clearskyAddFromLookup")),
942 "*abs_species* contains modern continua models but *propmat_clearsky_agenda*\n"
943 "cannot support these.");
946 not propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddZeeman"),
947 "*abs_species* contains Zeeman species but *propmat_clearsky_agenda*\n"
948 "does not contain *propmat_clearskyAddZeeman*.");
951 not propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddFaraday"),
952 "*abs_species* contains Zeeman species but *propmat_clearsky_agenda*\n"
953 "does not contain *propmat_clearskyAddFaraday*.");
956 !(propmat_clearsky_agenda.
has_method(
"propmat_clearskyAddParticles")),
957 "*abs_species* contains particles but *propmat_clearsky_agenda*\n"
958 "does not contain *propmat_clearskyAddParticles*.");
960 propmat_clearsky_agenda_checked = 1;
965 const Index& atmosphere_dim,
966 const Index& stokes_dim,
967 const Vector& f_grid,
968 const Matrix& sensor_pos,
969 const Matrix& sensor_los,
970 const Matrix& transmitter_pos,
971 const Matrix& mblock_dlos,
972 const Sparse& sensor_response,
973 const Vector& sensor_response_f,
975 const Matrix& sensor_response_dlos,
978 const Index nf = f_grid.nelem();
979 const Index nlos = mblock_dlos.nrows();
980 const Index n1y = sensor_response.nrows();
981 const Index nmblock = sensor_pos.nrows();
982 const Index niyb = nf * nlos * stokes_dim;
987 "*f_grid* must be a strictly increasing vector.");
992 "*sensor_pos* is empty. This is not allowed.");
994 "*sensor_los* is empty. This is not allowed.");
997 "The number of columns of sensor_pos must be "
998 "equal to the atmospheric dimensionality.");
1000 "For 1D and 2D, sensor_los shall have one column.");
1002 "For 3D, sensor_los shall have two columns.");
1004 "The number of rows of sensor_pos and sensor_los must be "
1005 "identical, but sensor_pos has ", nmblock,
" rows,\n"
1006 "while sensor_los has ", sensor_los.nrows(),
" rows.")
1008 "First column of *sensor_los* is not allowed to have values above 180.");
1009 if (atmosphere_dim == 2) {
1011 "For atmosphere_dim = 2, first column of "
1012 "*sensor_los* is not allowed to have values below -180.");
1015 "For atmosphere_dim != 2, first column of "
1016 "*sensor_los* is not allowed to have values below 0.");
1018 if (atmosphere_dim == 3) {
1020 "Second column of *sensor_los* is not allowed to have values above 180.");
1022 "Second column of *sensor_los* is not allowed to have values below -180.");
1026 if (!transmitter_pos.empty()) {
1028 "*transmitter_pos* must either be empty or have "
1029 "the same number of rows as *sensor_pos*.");
1031 "*transmitter_pos* must either be empty, have "
1032 "2 for 1D/2D or 3 columns for 3D.");
1038 "*mblock_dlos* is empty.");
1040 "The maximum number of columns in *mblock_dlos* is two.");
1041 if (atmosphere_dim < 3) {
1043 "For 1D and 2D *mblock_dlos* must have exactly one column.");
1049 "The *sensor_response* matrix does not have the right size,\n"
1050 "either the method *sensor_responseInit* has not been run or some\n"
1051 "of the other sensor response methods has not been correctly\n"
1057 n1y != sensor_response_dlos.nrows(),
1058 "Sensor auxiliary variables do not have the correct size.\n"
1059 "The following variables should all have same size:\n"
1060 "length of y for one block : ", n1y,
"\n"
1061 "sensor_response_f.nelem() : ", sensor_response_f.nelem(),
1062 "\nsensor_response_pol.nelem() : ", sensor_response_pol.
nelem(),
1063 "\nsensor_response_dlos.nrows(): ", sensor_response_dlos.nrows(),
void checkIsotopologueRatios(const ArrayOfArrayOfAbsorptionLines &abs_lines_per_species, const Species::IsotopologueRatios &isoratios)
Check that isotopologue ratios for the given species are correctly defined.
void checkPartitionFunctions(const ArrayOfArrayOfAbsorptionLines &abs_lines_per_species)
Check that ARTS was compiled for all requested species tags.
Index TotalNumberOfElements(const Array< Array< base > > &aa)
Determine total number of elements in an ArrayOfArray.
base max(const Array< base > &x)
Max function.
base min(const Array< base > &x)
Min function.
The global header file for ARTS.
bool has_method(const String &methodname) const
Check if method is in Agenda.
Index nelem() const ARTS_NOEXCEPT
void toupper()
Convert to upper case.
Internal cloudbox functions.
#define ARTS_ASSERT(condition,...)
#define ARTS_USER_ERROR(...)
std::string var_string(Args &&... args)
#define ARTS_USER_ERROR_IF(condition,...)
void abs_xsec_agenda_checkedCalc(Workspace &ws, Index &abs_xsec_agenda_checked, const ArrayOfArrayOfSpeciesTag &abs_species, const Agenda &abs_xsec_agenda, const Verbosity &)
void atmfields_checkedCalc(Index &atmfields_checked, const Index &atmosphere_dim, const Vector &p_grid, const Vector &lat_grid, const Vector &lon_grid, const ArrayOfArrayOfSpeciesTag &abs_species, const Tensor3 &t_field, const Tensor4 &vmr_field, const Tensor3 &wind_u_field, const Tensor3 &wind_v_field, const Tensor3 &wind_w_field, const Tensor3 &mag_u_field, const Tensor3 &mag_v_field, const Tensor3 &mag_w_field, const Index &abs_f_interp_order, const Index &negative_vmr_ok, const Verbosity &)
WORKSPACE METHOD: atmfields_checkedCalc.
constexpr Numeric DEG2RAD
void cloudbox_checkedCalc(Index &cloudbox_checked, const Index &atmfields_checked, const Index &atmosphere_dim, const Vector &p_grid, const Vector &lat_grid, const Vector &lon_grid, const Tensor3 &z_field, const Matrix &z_surface, const Tensor3 &wind_u_field, const Tensor3 &wind_v_field, const Tensor3 &wind_w_field, const Index &cloudbox_on, const ArrayOfIndex &cloudbox_limits, const Tensor4 &pnd_field, const ArrayOfTensor4 &dpnd_field_dx, const ArrayOfRetrievalQuantity &jacobian_quantities, const ArrayOfArrayOfSingleScatteringData &scat_data, const ArrayOfString &scat_species, const Matrix &particle_masses, const ArrayOfArrayOfSpeciesTag &abs_species, const Index &demand_latlon_margin, const Index &negative_pnd_ok, const Verbosity &)
WORKSPACE METHOD: cloudbox_checkedCalc.
void propmat_clearsky_agenda_checkedCalc(Workspace &ws, Index &propmat_clearsky_agenda_checked, const ArrayOfArrayOfSpeciesTag &abs_species, const Agenda &propmat_clearsky_agenda, const Verbosity &)
WORKSPACE METHOD: propmat_clearsky_agenda_checkedCalc.
void scat_data_checkedCalc(Index &scat_data_checked, const ArrayOfArrayOfSingleScatteringData &scat_data, const Vector &f_grid, const Numeric &dfrel_threshold, const String &check_level, const Numeric &sca_mat_threshold, const Verbosity &verbosity)
WORKSPACE METHOD: scat_data_checkedCalc.
void lbl_checkedCalc(Index &lbl_checked, const ArrayOfArrayOfAbsorptionLines &abs_lines_per_species, const ArrayOfArrayOfSpeciesTag &abs_species, const SpeciesIsotopologueRatios &isotopologue_ratios, const Verbosity &)
WORKSPACE METHOD: lbl_checkedCalc.
void atmgeom_checkedCalc(Index &atmgeom_checked, const Index &atmosphere_dim, const Vector &p_grid, const Vector &lat_grid, const Vector &lon_grid, const Tensor3 &z_field, const Vector &refellipsoid, const Matrix &z_surface, const Vector &lat_true, const Vector &lon_true, const Numeric &max500hpa_gradient, const Verbosity &)
WORKSPACE METHOD: atmgeom_checkedCalc.
void sensor_checkedCalc(Index &sensor_checked, const Index &atmosphere_dim, const Index &stokes_dim, const Vector &f_grid, const Matrix &sensor_pos, const Matrix &sensor_los, const Matrix &transmitter_pos, const Matrix &mblock_dlos, const Sparse &sensor_response, const Vector &sensor_response_f, const ArrayOfIndex &sensor_response_pol, const Matrix &sensor_response_dlos, const Verbosity &)
WORKSPACE METHOD: sensor_checkedCalc.
void scat_dataCheck(const ArrayOfArrayOfSingleScatteringData &scat_data, const String &check_type, const Numeric &threshold, const Verbosity &verbosity)
WORKSPACE METHOD: scat_dataCheck.
constexpr bool relaxationtype_relmat(PopulationType in) noexcept
constexpr Numeric LAT_LON_MIN
Global constant, minimum distance of cloudbox to lat/lon_grid edges.
constexpr auto deg2rad(auto x) noexcept
Converts degrees to radians.
bool is_wigner3_ready(const Rational &J)
Tells if the function is ready for Wigner 3J calculations.
Wigner symbol interactions.